It looks like the pension optimizer transferred income to my mother, but did not take the corresponding income amount away from my father.

[TurboTaxKim · Accepted solution]

The deduction for the split pension happens later in the return. Look at line number 210. The net income at line 236 will reflect the pension split. 

To see the detailed summary, click on "review" then "Bottom line tax summaries" then go to the "detailed tax summary".